Renderer inventory¶
Which projects call each exported renderer (fig_atlas.renderers, and the omics pack's
fig_atlas_omics.renderers), found by
static analysis of analysis/** and scripts/*.py. Tier sets the order
for renderer regression tests (roadmap Phase 0): 1 = used by a figure in the
storyline compendium, 2 = used by another live project, 3 = only by archived
projects, 4 = not called anywhere.
Compendium projects: none.
| Tier | Renderer | Module | Projects | Compendium users | Other users |
|---|---|---|---|---|---|
| 2 | place_panel_tags |
fig_atlas/renderers/panels.py |
1 | — | pilot-imaging |
| 2 | render_bar_scatter |
fig_atlas/renderers/bar_scatter.py |
1 | — | pilot-imaging |
| 2 | render_image_panel |
fig_atlas/renderers/image_panel.py |
1 | — | pilot-imaging |
| 2 | render_line_band |
fig_atlas/renderers/line_band.py |
1 | — | pilot-imaging |
| 4 | align_title_to_labels |
fig_atlas/renderers/panels.py |
0 | — | — |
| 4 | count_cluster_row_groups |
fig_atlas_omics/renderers/cross_condition_heatmap.py |
0 | — | — |
| 4 | describe_stars |
fig_atlas_omics/renderers/tf_expression_bars.py |
0 | — | — |
| 4 | panel_label |
fig_atlas/renderers/panels.py |
0 | — | — |
| 4 | render_binary_motif_heatmap |
fig_atlas_omics/renderers/binary_motif_heatmap.py |
0 | — | — |
| 4 | render_boxplot |
fig_atlas/renderers/boxplot.py |
0 | — | — |
| 4 | render_chromosome_ideogram |
fig_atlas_omics/renderers/chromosome_ideogram.py |
0 | — | — |
| 4 | render_cis_linkage_panel |
fig_atlas_omics/renderers/cis_linkage.py |
0 | — | — |
| 4 | render_clustered_go_heatmap |
fig_atlas_omics/renderers/clustered_go_heatmap.py |
0 | — | — |
| 4 | render_count_summary |
fig_atlas_omics/renderers/count_summary.py |
0 | — | — |
| 4 | render_cross_condition_dotplot |
fig_atlas_omics/renderers/cross_condition_dotplot.py |
0 | — | — |
| 4 | render_cross_condition_heatmap |
fig_atlas_omics/renderers/cross_condition_heatmap.py |
0 | — | — |
| 4 | render_dose_response |
fig_atlas/renderers/dose_response.py |
0 | — | — |
| 4 | render_dot_matrix |
fig_atlas/renderers/dot_matrix.py |
0 | — | — |
| 4 | render_effect_dots |
fig_atlas/renderers/effect_dots.py |
0 | — | — |
| 4 | render_flow_diagram |
fig_atlas/renderers/flow_diagram.py |
0 | — | — |
| 4 | render_funnel |
fig_atlas/renderers/funnel.py |
0 | — | — |
| 4 | render_gene_model_track |
fig_atlas_omics/renderers/gene_model_track.py |
0 | — | — |
| 4 | render_go_bar |
fig_atlas_omics/renderers/go_bar.py |
0 | — | — |
| 4 | render_go_cluster_dot |
fig_atlas_omics/renderers/go_cluster_dot.py |
0 | — | — |
| 4 | render_go_dot |
fig_atlas_omics/renderers/go_dot.py |
0 | — | — |
| 4 | render_go_rrvgo_treemap |
fig_atlas_omics/renderers/go_rrvgo_treemap.py |
0 | — | — |
| 4 | render_group_scatter |
fig_atlas/renderers/group_scatter.py |
0 | — | — |
| 4 | render_grouped_hbar |
fig_atlas/renderers/grouped_hbar.py |
0 | — | — |
| 4 | render_heatmap |
fig_atlas/renderers/heatmap.py |
0 | — | — |
| 4 | render_histogram |
fig_atlas/renderers/histogram.py |
0 | — | — |
| 4 | render_interval_track |
fig_atlas_omics/renderers/interval_track.py |
0 | — | — |
| 4 | render_jaccard_heatmap |
fig_atlas/renderers/jaccard_heatmap.py |
0 | — | — |
| 4 | render_ma_plot |
fig_atlas_omics/renderers/ma_plot.py |
0 | — | — |
| 4 | render_motif_architecture_table |
fig_atlas_omics/renderers/motif_table.py |
0 | — | — |
| 4 | render_motif_dotplot |
fig_atlas_omics/renderers/motif_dotplot.py |
0 | — | — |
| 4 | render_multi_group_heatmap |
fig_atlas/renderers/multi_group_heatmap.py |
0 | — | — |
| 4 | render_paired_dumbbell |
fig_atlas/renderers/dumbbell.py |
0 | — | — |
| 4 | render_pathway_evidence_dotplot |
fig_atlas_omics/renderers/pathway_evidence_dotplot.py |
0 | — | — |
| 4 | render_pathway_test_matrix |
fig_atlas_omics/renderers/pathway_test_matrix.py |
0 | — | — |
| 4 | render_pca |
fig_atlas/renderers/pca.py |
0 | — | — |
| 4 | render_peak_feature_composition |
fig_atlas_omics/renderers/peak_feature_enrichment.py |
0 | — | — |
| 4 | render_peak_feature_enrichment |
fig_atlas_omics/renderers/peak_feature_enrichment.py |
0 | — | — |
| 4 | render_sample_metric_bars |
fig_atlas/renderers/sample_metric_bars.py |
0 | — | — |
| 4 | render_segment_array |
fig_atlas_omics/renderers/segment_array.py |
0 | — | — |
| 4 | render_signed_heatmap |
fig_atlas/renderers/signed_heatmap.py |
0 | — | — |
| 4 | render_single_tf_expression_scatter_bar |
fig_atlas_omics/renderers/tf_expression_bars.py |
0 | — | — |
| 4 | render_species_response_scatter |
fig_atlas_omics/renderers/species_response_scatter.py |
0 | — | — |
| 4 | render_stacked_bar |
fig_atlas/renderers/stacked_bar.py |
0 | — | — |
| 4 | render_stacked_share_hbar |
fig_atlas/renderers/stacked_share_hbar.py |
0 | — | — |
| 4 | render_survival |
fig_atlas/renderers/survival.py |
0 | — | — |
| 4 | render_tf_expression_scatter_grid |
fig_atlas_omics/renderers/tf_expression_bars.py |
0 | — | — |
| 4 | render_threshold_scatter |
fig_atlas/renderers/threshold_scatter.py |
0 | — | — |
| 4 | render_tier_hbar |
fig_atlas/renderers/tier_hbar.py |
0 | — | — |
| 4 | render_treatment_schematic |
fig_atlas/renderers/treatment_schematic.py |
0 | — | — |
| 4 | render_ts_profile |
fig_atlas/renderers/ts_profile.py |
0 | — | — |
| 4 | render_two_set_euler |
fig_atlas/renderers/two_set_euler.py |
0 | — | — |
| 4 | render_venn |
fig_atlas/renderers/venn.py |
0 | — | — |
| 4 | render_violin |
fig_atlas/renderers/violin.py |
0 | — | — |
| 4 | render_volcano |
fig_atlas_omics/renderers/volcano.py |
0 | — | — |
Summary: tier 2 active — 4, tier 4 unused — 55.